Giotto Suite: a multiscale and technology-agnostic spatial multiomics analysis ecosystem (nature.com)

• Modular R package for spatial multiomics analysis
• Technology-agnostic data framework for multiple scales
• Supports FAIR principles and interoperability

"Giotto Suite is a modular R package suite for spatial multiomics data analysis. It provides a technology-agnostic framework to represent and integrate data from different scales and modalities, including transcriptomics, proteomics, and imaging. The software adheres to FAIR principles and includes capabilities for segmentation, registration, multimodal integration, and scalable processing of large datasets. Applications are demonstrated on MERFISH, Xenium, Visium, and Stereo-seq data."