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Spotlight Jun 09

Featured Spotlight

Microprotein Reproducibility Crisis and Path to Clinical Translation: Integration of Benchmarking, Immunopeptidomics, and Regulatory Hurdles

Analysis Briefing

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7-DAY ROUNDUP

Microbiome breakthroughs: gut metabolites shape immunity and muscle health, while new tools enable decentralized proteomics and viral discovery.

  1. Metagenomic analysis reveals gut microbiota compositional and functional shifts in female IBS patients (nature.com) | just now
  2. Stochastic assembly influences functional potential, redundancy, and trait patterns in bacterial communities (microbiomejournal.biomedcentral.com) | 6h ago
  3. Precisely designed keystone metabolites boost shrimp disease resistance by recruiting symbionts via the lipoxin A4–AP-1 pathway (microbiomejournal.biomedcentral.com) | just now
  4. Longitudinal microbial source tracking on China Space Station identifies cargo and cabin contributions (microbiomejournal.biomedcentral.com) | 11d ago
  5. Seed Microbiome: Composition, Functions, and Future Directions in Plant Health and Sustainable Agriculture (link.springer.com) | just now
  6. Ethical framework for global human microbiome research advocates co-laboration to address Western bias (link.springer.com) | just now
  7. Integrative Multi-Omics Analysis of Cecal Microbiome in BXD Mice Reveals Diet, Age, and Genotype Effects on Host Phenotypes (microbiomejournal.biomedcentral.com) | 28d ago
  8. Ethical challenges and co-laboration framework for global human microbiome research (link.springer.com) | 63d ago
  9. Integrated metatranscriptomics identifies Lachnospiraceae as keystone taxa regulating rumen biohydrogenation and milk ω-6/ω-3 polyunsaturated fatty acids ratio in dairy cows (microbiomejournal.biomedcentral.com) | 57d ago
  10. Metagenomic analysis of wild boar faecal microbiome reveals novel species and carbohydrate degraders distinguishing wild from domestic pigs (microbiomejournal.biomedcentral.com) | 68d ago
  11. Multi-omics study reveals rumen microbiome-metabolite associations with early lactation performance in dairy cows (microbiomejournal.biomedcentral.com) | 63d ago
  12. Study validates mRNA-seq for simultaneous host transcriptome and microbiome profiling in vulvar samples (ncbi.nlm.nih.gov) | 40d ago
  13. Chinese household dust microbiome study quantifies pathogen abundance, virulence factors, and extracellular vesicle contributions (microbiomejournal.biomedcentral.com) | 50d ago
  14. Multi-body site microbial interactions shape the human plasma metabolome (microbiomejournal.biomedcentral.com) | 61d ago
  15. Review of the seed microbiome: composition, functions, and research gaps (microbiomejournal.biomedcentral.com) | 66d ago
  16. Shotgun metagenomic analysis of gut microbiota in Swedish female IBS patients reveals modest compositional and functional shifts (nature.com) | 20d ago
  17. Neighborhood deadwood and yard rewilding modulate commensal microbiomes and inflammatory signals among urbanites (static-content.springer.com) | 14d ago
  18. Neighborhood deadwood and yard rewilding modulate commensal microbiomes and inflammatory signals among urbanites (microbiomejournal.biomedcentral.com) | 14d ago
  19. Bacillus megaterium KCTC 3007 promotes antitumor immunity in endometrial cancer via TMAO and type I interferon: a multi-omics study on South Korean patients (microbiomejournal.biomedcentral.com) | 50d ago
  20. mRNA-seq enables simultaneous host transcriptome and microbiome profiling in vulvar samples (microbiomejournal.biomedcentral.com) | 33d ago
  21. Yard rewilding with deadwood alters skin and oral microbiomes and inflammatory markers in Finnish study (microbiomejournal.biomedcentral.com) | 25d ago
  22. Multi-omics analysis links rumen bacterial communities to sheep fertility across reproductive stages (microbiomejournal.biomedcentral.com) | 27d ago
  23. Human Microprotein Atlas platform annotates over 600,000 microproteins (nature.com) | 28d ago
  24. Metatranscriptomic analysis of tumor tissue microbiota in colon cancer (microbiomejournal.biomedcentral.com) | 28d ago
  25. Convergent evolution of intestinal lineages in the phylum Methanobacteriota (microbiomejournal.biomedcentral.com) | 38d ago
  26. Metagenomics and culturomics reveal dual role of gut microbiome in immune checkpoint inhibitor therapy (microbiomejournal.biomedcentral.com) | 36d ago
  27. Multi-omics study reveals microbial decomposer network during brine shrimp carcass decomposition in a Chinese hypersaline lake (microbiomejournal.biomedcentral.com) | 70d ago
  28. Multi-omics reveals effects of several rumen bacteria on reproductive performance of sheep (microbiomejournal.biomedcentral.com) | 14d ago
  29. Cystic fibrosis respiratory microbiota remodelling over three years of elexacaftor–tezacaftor–ivacaftor therapy in a multi-centre cohort (microbiomejournal.biomedcentral.com) | 10d ago
  30. Metatranscriptomic analysis of colon cancer tumor tissue microbiota (static-content.springer.com) | just now
  31. Study identifies Pantoea ananatis as a regulator of adaptive thermogenesis and lipid metabolism in high-altitude macaques (microbiomejournal.biomedcentral.com) | 12d ago
  32. Ethical concerns in human microbiome research: bias, inclusion, and co-laboration framework (microbiomejournal.biomedcentral.com) | 63d ago
  33. Longitudinal study links salivary microbiome changes to chemoradiotherapy response in oral cancer patients (microbiomejournal.biomedcentral.com) | 922d ago
  34. Loss of Salivary Agglutinin (DMBT1) Alters Salivary Microbiome and Accelerates Oral Squamous Cell Carcinoma Development in Mice (microbiomejournal.biomedcentral.com) | 60d ago
  35. Salivary microbiome changes distinguish response to chemoradiotherapy in patients with oral cancer (link.springer.com) | 1074d ago
  36. RNA-seq reveals active microbiome functional roles across coral Porites lutea compartments (microbiomejournal.biomedcentral.com) | 38d ago
  37. Gastrointestinal microbial nitrogen metabolism shapes nitrogen use efficiency in goats fed soybean meal vs. corn gluten meal (microbiomejournal.biomedcentral.com) | 50d ago
  38. Uterine microbiome shifts from stochastic to deterministic assembly in aged laying hens, with Rhodococcus ruber spermidine production rescuing oxidative phosphorylation impairment (microbiomejournal.biomedcentral.com) | 11d ago
  39. Commentary calls for ethical, locally led microbiome research to address global inequities (microbiomejournal.biomedcentral.com) | 63d ago
  40. Metatranscriptomic analysis of colon cancer tumor tissue microbiota (static-content.springer.com) | just now
  41. 1,700 new small proteins discovered in dark proteome (prinsesmaximacentrum.nl) | 34d ago
  42. Autophagy triggers dysbiosis: 16S rRNA sequencing of Drosophila gut microbiota (ngdc.cncb.ac.cn) | 351d ago
  43. Data Release: Autophagy and Dysbiosis Study on Drosophila Gut Metagenome (ngdc.cncb.ac.cn) | 351d ago
  44. New Discoveries of Non-Canonical Open Reading Frames Expand the Human Proteome (youtube.com) | 14d ago
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